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Directly following Chemical Genomics: Organic Chemistry Initiating Discovery  

October 7-8, 2003 Boston Park Plaza Hotel, Boston, MA

Through diversity-oriented synthesis, chemists are achieving more structural complexity than in the early days of combinatorial chemistry, tackling compounds with multiple stereocenters and complex, natural product-like libraries. Preparation of structurally complex and diverse compounds results in a broader population of chemical space and facilitates effective probing of biological space. Structural complexity is very significant because many of the small molecules known to disrupt protein-protein interactions are complex natural products or natural product-like compounds. The potential for therapeutic development depends however not only upon structural complexity but also upon synthetic accessibility and scalability. Achieving this difficult balance demands innovative chemistry such as that described at this symposium. Attend this event to hear the latest developments in diversity-oriented synthesis and its impact on drug development.

Who Should Attend
Vice Presidents, Directors, Research Scientists in Combinatorial Chemistry, Natural Product Chemistry, Discovery Chemistry and Medicinal Chemistry

Keynote Presentations
Diversity-Oriented Synthesis, Chemical Genetics, and ChemBank
Dr. Stuart L. Schreiber, Harvard Institute of Chemistry & Cell Biology (ICCB), Harvard University

Peptide Morphing
Dr. Gregory Verdine, Department of Chemistry and Chemical Biology, Harvard University

Advisory Committee
Dr. Prabhat Arya, Chemical Biology Program, Steacie Institute for Molecular Sciences, National Research Council of Canada
Dr. Neerja Bhatnagar, Head, Natural Product Chemistry, DI&A/Chemistry/High Performance Unit, Aventis
Dr. Larry Hardy, Head of Biology, Aurigene Discovery Technologies
Dr David R. Spring, Department of Chemistry, University of Cambridge
Dr. Derek S. Tan, Laboratory of Chemistry & Chemical Genetics; Assistant Member, Molecular Pharmacology & Chemistry Program; Member, Tri-Institutional Training Program in Chemical Biology, Memorial Sloan-Kettering Cancer Center
Conference Features
  • Speakers from Aventis, Amgen, AstraZeneca, Bayer,
    Novartis, Pfizer, Wyeth
  • Boston's Chemistry Centers of Excellence
    Boston College | Boston University | Harvard University
  • Facilitated Roundtable Discussion
  • Judged Poster Contest
  • Exhibit Hall

 

THURSDAY, OCTOBER 9

8:00-8:30am Coffee and Registration

Boston's Chemistry Centers Of Excellence

8:30-8:40 Chairperson's Remarks
Dr. Larry Hardy, Head of Biology, Aurigene Discovery Technologies

 

8:40-9:40 KEYNOTE ADDRESS
Diversity-Oriented Synthesis, Chemical Genetics, and ChemBank
Dr. Stuart L. Schreiber, Investigator, Howard Hughes Medical Institute, Morris Loeb Professor and Chair, Chemistry & Chemical Biology, Director, Initiative for Chemical Genetics (ICG), Co-Director, Harvard Institute of Chemistry & Cell Biology (ICCB) Harvard University 
To explore biology systematically using small molecules will require three advances. We need the right set of small molecule modulators. The current set populates chemical descriptor space densely in a limited number of regions and sparsely in many promising regions. Diversity-oriented synthesis aims to address this need. We need to develop methods to measure the outcome of small molecule-based perturbations globally. Chemical genetics aims to address this second need. Finally, we need to manage the data in a way that allows the outcome of all experiments to be at least as useful as the outcome of individual experiments. ChemBank has been established to address this last need. Elements of these three research advances will be presented.

9:40-10:10 Expanded Chemical Diversity
Using Stereocontrolled Synthesis

Dr. John A. Porco, Jr., Department of Chemistry, Boston University 
Projects underway at the Boston University Center for Chemical
Methodology and Library Development (CMLD-BU) involve stereochemi-cal
and positional variation within the molecular framework as diversity
elements for library design. This seminar will focus on examples of this
strategy, including novel scaffolds, tools, diversity reagents, and related
strategies for the synthesis of complex molecule libraries
 

10:10-11:10 Coffee Break, Poster and Exhibit Viewing

11:10-11:40 Diversity-Oriented Catalyst Discovery for Diversity-Oriented Synthesis
Dr. Scott Miller, Professor of Chemistry, Boston College 
The development of combinatorial techniques to assist enantioselective catalyst discovery will be described. In addition, applications of the techniques and catalysts to the synthesis of biologically active molecules will be discussed.

11:40-12:10 Panel Discussion (Q&A with the above speakers)

12:10-1:40 Lunch, Poster and Exhibit Viewing


The Pharmaceutical Focus

1:40-1:50 Chairperson's Remarks
Dr. Norton Peet, CEO, Aurigene Discovery Technologies

1:50-2:10 Computer Assisted MPS Approaches to Disparate Core Synthesis
Dr. William F. Michne, Senior Principal Scientist, AstraZeneca
Our efforts to resynthesize depleted compounds in structurally diverse biology-based sets led us to explore several approaches to diversity-oriented synthesis. In particular, novel software assisted organization of multiparallel synthesis to enable efficient preparation of compounds with disparate cores will be described.

2:10-2:40 Rapid Assembley of Molecular Diversity via Exploitation of Isocyanide based Multi-component Reactions
Dr. Chris Hulme, Head of Combinatorial Chemistry, Amgen
This talk reviews the development of chemical methodology over the last several years, concentrating on novel secondary reactions of IMCRs (isocyanide multi-component reactions) and introduces the UDC (Ugi/De-BOC/Cyclize) & BIFA (bifunctional approach) concepts applied to IMCR lead generation. With the advent of functional proteomics delivering hundreds of new targets to drug discovery, ultra-high-throughput screening and a premium on novel biologically active entities, it seems reasonable to speculate that the discovery of new IMCRs will continue, spawning multiple post-condensation possibilities via secondary reactions. Indeed, from the one-step preparation of local anaesthetic XylocainTM to the multi-step preparation of the HIV protease inhibitor CrixivanTM, isocyanide based multicomponent reactions have experienced a resurgence of interest and appear well positioned for a stronger impact as we enter the post-genomic era in the new millenium.

2:40-3:10 From Target to Lead - The Impact of Combinatorial Technologies
Dr. Joszef Aszodi, Site Director, Aventis Combinatorial Technology Center
In its early days, diversity-oriented combinatorial chemistry was conceived as a tool for complementing drug discovery compound collections in order to populate new areas of the chemical space that was not covered by historical libraries. However, over the last few years it has matured into a more powerful technology that provides the ability to efficiently produce large numbers of even synthetically challenging lead-like molecules. When combined with other high throughput tools, these libraries are now delivering high quality lead compounds. This presentation will describe such a lead discovery engine built within Aventis and explore its potential application across early drug discovery from target to lead.

3:10-3:40 Refreshment Break

3:40-4:10 Synthesis of 8-Desbromohinckdentine A
Dr. William W. McWhorter, Jr., Principal Research Scientist, Pfizer, Inc.
Hinckdentine A, a structurally unique indole alkaloid isolated from the bryozoan Hincksinoflustra denticulate, contains biologically important dihydrotryptamine and dihydropyrimidine units within its framework. The synthesis of the hinckdentine A skeleton features a pinacol-like rearrangement, which forms the quaternary center of the natural product, and an efficient seven-membered ring-forming intramolecular aldol condensation as the key steps. The flexible synthetic route to this fascinating molecular architecture allows the preparation of an array of novel alkaloid probes of biological space.

4:10-4:40 Diversity Oriented Synthesis for Pharmaceutically Relevant Molecules
Dr. Michael A. Foley, Vice President, Chemical Technologies, Infinity Pharmaceuticals
This presentation will cover strategies and methods for thestereoselective synthesis of pharmaceutically relevant molecules. Thepresentation will also cover emerging strategies and methods forefficiently extracting the subtle structure activity relationshipsbetween isomers of stereochemically complex molecules.

4:40-5:00 Panel Discussion

5:00 Close of the Day

 

FRIDAY, OCTOBER 10

7:30-8:15am Coffee, Technology Workshops Sponsored By:
An Intelligent Approach to Chemistry Development
The Impact of Drug Discovery Technologies on Reducing Development Time
Presented By Hans Johansson, President & COO, Personal Chemistry

 

Natural Product Diversity

8:30-8:40 Chairperson's Remarks
Dr. Richard Versace, Senior Scientist, Oncology Department, Novartis Institute for Biomedical Research

8:40-9:10 Future Potential of Natural Products as Quality Leads, Attempts for a Qualitative and Quantitative Assessment
Dr. Matthias Gehling, Head of Natural Products Research, Bayer AG, Pharma
The importance of natural products as drugs for life science applications can easily be drawn from actual sales figures of marketed products and their impact as biochemical tools, as well as inspiring starting point for chemical/biological optimisation to become a useful product. However, regarding the identification of new innovative bioactive compounds from nature, the value assessment of certain biological material towards molecular diversity and thus improvement of probability of success, is still challenging. This even increases the intrinsic high costs of this research. This presentation will emphasize the potential of natural products and will touch on perspectives on how they can contribute to the value generation chain of the life science industry in the future.

9:10-9:40 Novel Indole Alkaloid Based Screening Libraries for Drug Discovery
Dr. Demos Fokas, Senior Investigator, Chemistry, ArQule, Inc.
Polycyclic indole alkaloids continue to be a widely studied class of compounds both for their biological relevance and structural complexity. These natural and unnatural indole ring systems are also of interest as the basis for the creation of primary screening libraries for drug discovery. The synthetic challenges to access this interesting and diverse class of compounds will be described along with the application of the chemistry to the automated parallel synthesis of indole alkaloid libraries.

9:40-10:10 Natural Products Research at Novartis Pharma
Dr. Frank Petersen, Head, Natural Products Unit, Novartis
The natural products research group sustainably contributes to the development pipeline of Novartis Pharma. Outlining reasons for the increasing pressure on drug discovery, concepts are discussed, how pharmaceutical companies reacts on these challenges in their natural products directions. In the mirror of concrete examples from Novartis Pharma, it will be discussed, why natural products are still an still important and productive source for new biologically active metabolites and innovative drugs.

10:10-10:30 Coffee Break

10:30-11:00 Chemical Novelty and Biological Relevance of Natural Products
Dr. Dwight Baker, Senior Director, Albany Molecular Research, Inc.
Small molecule natural product compounds have been selected over millions of years by evolution as effectors of biological processes. Throughout the past few decades, hundreds of these have been identified as useful therapeutic drugs, or the starting point for medicinal chemistry programs, for a wide range of human, animal and plant diseases. Additional novel chemical structures are yet to be discovered that will be incorporated into tomorrow's medicines. Examples of the utility and modern approaches to natural product discovery will be reviewed.

11:00-11:30 New Technologies for Natural Product Discovery
Dr. Frank Koehn, Head of the Natural Products Chemistry Group, Wyeth
The modern drug discovery environment is characterized by a steadily increasing number of available targets, coupled with a necessity to reduce Discovery cycle times. In order to be a high-impact component of the accelerated Discovery process, a natural products program must share the same sense of urgency and strategic priorities. In this talk we will describe the developent and application of new methods and technologies which enable the rapid detection, prioritization, isolation and structure elucidation of relevant natural product drug leads.

11:30-12:00 Panel Discussion

12:00-1:30 Lunch (on your own)

 

Emerging Company Showcase

1:30-1:40 Chairperson's Remarks
Dr. Michael A. Foley

1:40-2:00 Natural Product Scaffolds as the Core of Drug Discovery
Dr. Larry Hardy
Deconvolution of actives from natural product extracts is highly risky and very demanding of both time and money. This is why, despite the extensive history of natural products as sources of therapeutic agents, the pursuit of new biological sources of drug candidates has been nearly abandoned by many pharmaceutical companies. Yet the interest in natural compounds remains high. In this presentation, the intrinsic advantages of leveraging the core structures of natural products for diversity oriented synthesis in lead generation will be outlined briefly. We will then describe the parallel hemi-synthetic approach developed at Aurigene to effectively capture the attractive biological and physicochemical features of natural product scaffolds, while avoiding the risk and time bottlenecks of extracts. Several dozen natural product scaffolds with unique properties are being explored. We recently found that one of these is a previously unsuspected but significant inhibitor of a therapeutic target enzyme. The approaches we have developed for small molecule libraries are cost-effective, efficient, expedient and amenable to solid and solution phase parallel synthetic methods. Production of the small molecule libraries is guided by computational estimates of both the chemical diversity and the ADME properties of the virtual libraries. The synthetic campaign for elaborating one specific scaffold will be explored in detail, to demonstrate explicitly how a natural product scaffold can be used as an edifice from which to launch pursuits of several target proteins.

2:00-2:20 A Systematized Platform for Exploiting Biosynthesis for DOS Based Drug Discovery
Dr. Michael Chaparian, President & Chief Scientific Officer, SelectX Pharmaceuticals, Inc.
The de novo biosynthesis of natural products, including glycosylation, represents the holy grail of complexity generating chemistries that are vital for DOS based discovery. Biosynthetic examples of DOS include the polyketides and terpenes, as well as the enormous additional diversity achieved through glycosylation of virtually all classes of natural products. However, exploitation of the full power of biosynthetic chemistries has been difficult, with most successes centered around only simple single-enzyme biotransformations. We have innovated a systematized integration of informatics, molecular genetics, and biochemistry to fully exploit the power of biosynthetic chemistries for the generation of DOS derived small molecule libraries of both natural products and natural product-like compounds. This multidisciplinary platform is underpinned by molecular selection, resulting in significant advantages over conventional screening and rapid scale-up of hits. Example applications of this platform will be described.

2:20-2:40 Diversity Oriented Synthesis and Multiple Reaction Pathway: Strategies to construct diversity by carbon-carbon, and carbon-het-ero bond formation.
Dr. Zhen Yang, Director of Chemistry, VivoQuest, Inc.
VivoQuest is a small molecule based drug discovery company that utilizes powerful diversity-oriented synthetic chemistry (“ChemQuest”) for the rapid discovery and development of drugs to treat a wide variety of indi-cations.  VivoQuest has developed a platform of diverse natural product related small-molecule libraries. The company’s ChemQuest libraries embody the structural complexity of natural products, but can be diversi-fied widely, produced cheaply and subjected to rapid structure/activity optimization. VivoQuest has surveyed the natural products diversity space and identified scaffolds or core motifs that tend to recur in potent drugs.  The company has elaborated these core motifs through creative carbon-carbon and carbon-heteroatom bond forming strategies to synthesize diverse drug-like molecules with natural product properties. Screening of the ChemQuest libraries in HCV and HIV discovery programs has yielded attractive hits for advancement in pre-clinical discovery.

2:40-3:20 Closing Keynote Address
Peptide Morphing
Dr. Gregory Verdine, Erving Professor of Chemistry, and Associate Member, Department of Molecular and Cellular Biology, Harvard University 
We have been exploring the use of a new strategy that we term "peptide morphing" to generate potent bioactive ligands to peptide receptors. This strategy entails the use of side-chain information from peptides to program the synthesis of exhaustively stereodiversified libraries of polyketide-like molecules. Progress toward the creation of potent, selective ligands for the Mu-opioid receptor will be reviewed.

3:20-3:30 Q&A

3:30 Close of the Conference


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TRAVEL INFORMATION
Special Airline Discounts Available
Special Zone and Discount Fares have been
established for this conference with United Airlines. Please call United Airlines Meeting Reservation Desk at 800-521-4041 and reference ID#579YS.

HOTEL INFORMATION
Boston Park Plaza Hotel
64 Arlington Street
Boston, MA 02116
Phone: 617-426-2000 o Fax: 617-426-5545
Cut-off: Sept. 12, 2003
$189 single $199 double

Please call the hotel directly to make your room reservation. Identify yourself as a Cambridge Healthtech Institute conference attendee to receive the reduced room rate. Reservations made after the cut-off date or after the group room block has been filled (whichever comes first) will be accepted on a space-and-rate-availability basis. Rooms are limited, so please book early.


 

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